NIFTY - Nice Interface For Testing Your Data

Select the search form below to enter your data. Click on the question mark for help with any selection, or read the main help file.

Searching for Marker Information

Search GDB for complete marker information
Marker Name:

For additional names your marker may go by:

Marker Name: ?

For YACs your marker is positive for,
primer sequences, number of alleles, and heterozygosity

Marker Name: ?

For Stanford G3 Radiation Hybrid Mapping location

Marker Name:

To access complete sequence data for your marker (or gene)

Name of gene or marker:
You can make your search more specific by specifying (or eliminating) the source organism of interest.
and or but not ?

Select Database:
GenBank Updates - recent additions to the database only
GenBank - full database

For complete sequence, GDB information, PCR primers, genetic mapping,
YAC hits, contig info, radiation hybrid data, and more...

Marker Name: ?

Get vast amounts of info on genes - including nearby markers (if it's mapped).

Gene Name/Symbol:

Searching for YAC Information

Yac name: ?

Multiple YACs - Separate YAC names by spaces.

Chromosome Browsing

Select Chromosome:
Map of contigs anchored to integrated (RH + genetic) map
Map of contigs anchored to radiation hybrid map
Complete radiation hybrid map
Map of contigs anchored to genetic map
List of all STSs assigned to chromosome


Search for genes and markers in your specific area

Chromosomal Location: ?

Select Database:
GenBank Updates - recent additions to the database only
GenBank - full database

Entrez Search of Medline:

Search Field: Search Mode:

Enter Term : Clear All

Gapped BLAST search (v2.0):

Choose program to use and database to search:

     Program Database
                 Perform ungapped alignment

The query sequence is filtered for low complexity regions by default.
Enter here your input data as

These links are probably no good anymore.  If you ever use any of them, please email me and let me know.  Otherwise, I think I might just delete this section of the page.  If there are any you would like to see here, let me know that as well.

And I'm getting about 240 hits a week on this page, so I guess it's more than just the folks at NIH.  That's pretty neat.  I miss you guys!  Email me now and then! 

If you have any suggestions on making this page better, please send email to

HTML by Warren

Warren S. Apel

Esquilax Productions